BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005C05SP1|AL425348
(940 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1743 1755 0.0
>3x_Contig1743
Length = 20172
Score = 1755 bits (874), Expect = 0.0
Identities = 914/939 (97%), Gaps = 1/939 (0%)
Strand = Plus / Minus
Query: 1 atttcmacctcatcgctcgacaagga-catttggttgatttggtcaatctgttaatctca 59
||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 16086 atttcaacctcatcgctcgaaaaggaacatttggttgatttggtcaatctgttaatctca 16027
Query: 60 cagttaccccaagatcaatcaactaaggctagcytcaatttaactagattcatttttgat 119
|||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 16026 cagttaccccaagatcaatcaactaaggatagcttcaatttaactagattcatttttgat 15967
Query: 120 accttcctgcatatcactcgagcccataagacccgactagaatctcactgggttaaacca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15966 accttcctgcatatcactcgagcccataagacccgactagaatctcactgggttaaacca 15907
Query: 180 cttctctcagcmattattaaggctgctttttttaatgagtctgataatagtmaattatct 239
||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 15906 cttctctcagcaattattaaggctgctttttttaatgagtctgataatagtaaattatct 15847
Query: 240 gagcytgctaaagagagattatattccattctcggagaacttattagcgagccctcgaaa 299
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15846 gagcttgctaaagagagattatattccattctcggagaacttattagcgagccctcgaaa 15787
Query: 300 agtagtggagacatttcaacctggccttacatcgctttacagatcattttgamaatcgag 359
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 15786 agtagtggagacatttcaacctggccttacatcgctttacagatcattttgaaaatcgag 15727
Query: 360 gggtctggmtctactctttccattgaccttgatgaagatttggaatctgttagamaatct 419
|||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 15726 gggtctggatctactctttccattgaccttgatgaagatttggaatctgttagaaaatct 15667
Query: 420 gcgattaagagtttgaagcaaaaccattcagataacaagaataacacaaatcctaagcta 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15666 gcgattaagagtttgaagcaaaaccattcagataacaagaataacacaaatcctaagcta 15607
Query: 480 aatggtcttgagctcctcctatctgtggccatcttgcmactatatgcyggggatgaagaa 539
||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 15606 aatggtcttgagctcctcctatctgtggccatcttgcaactatatgctggggatgaagaa 15547
Query: 540 tctgtgtccattttacmagayctaatatcattctatgaagaatgtgataaagaatccact 599
|||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 15546 tctgtgtccattttacaagatctaatatcattctatgaagaatgtgataaagaatccact 15487
Query: 600 gacttggttggtatcacggagattctactatcattagttgctcamagamaatctttgnng 659
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |
Sbjct: 15486 gacttggttggtatcacggagattctactatcattagttgctcaaagaaaatctttgttg 15427
Query: 660 naaammttaagncttatagngtgggaatctttcgtgcatgatatcggcgaacctgaactc 719
||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 15426 aaaaaattaagtcttatagtgtgggaatctttcgtgcatgatatcggcgaacctgaactc 15367
Query: 720 aatgtactattacaaamattgactgccagagagaataaacaaggttttgctgatcttttt 779
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15366 aatgtactattacaaacattgactgccagagagaataaacaaggttttgctgatcttttt 15307
Query: 780 gaaggtgatgaagaagaggacgacgaggatgctgttgaacgaggaacagatgatgatgat 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15306 gaaggtgatgaagaagaggacgacgaggatgctgttgaacgaggaacagatgatgatgat 15247
Query: 840 gatgaagatgatgaagacaatgatgacgatgatgaacctagtgctgaagattctgaggac 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15246 gatgaagatgatgaagacaatgatgacgatgatgaacctagtgctgaagattctgaggac 15187
Query: 900 gatgtttctgaagaagacaaggatgccgctttggaaaaa 938
|||||||||||||||||||||||||||||||||||||||
Sbjct: 15186 gatgtttctgaagaagacaaggatgccgctttggaaaaa 15148
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7935
Number of Sequences: 1807
Number of extensions: 7935
Number of successful extensions: 426
Number of sequences better than 1.0e-20: 1
length of query: 940
length of database: 10,358,551
effective HSP length: 16
effective length of query: 924
effective length of database: 10,329,639
effective search space: 9544586436
effective search space used: 9544586436
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.9 bits)